Kidneys are cut in half longitudinally and embedded in paraffin. If two kidneys are present from a single animal, one is cut longitudinally and one is cut in cross section, then both are embedded in a single block. Sections are cut and stained with H&E. An additional section may be stained for PAS.
Kidneys were scored according to the following system, developed by Chan, Madaio, and Shlomchik [1] and modified by Bendele to suit the current lesion severity in this study. The percentage of glomeruli with crescents was also estimated, and protein casts were counted. Scores were determined based on these counts and measurements as follows:
Glomerulus Score and Measurement
The diameters of twenty representative glomeruli are measured for each kidney, and a mean is determined. A score is assigned based on that mean as follows:
The percentage of glomeruli with crescents is estimated, and a score assigned as follows:
Protein Cast Severity (Cortical Tubules) Score
The number of tubules with protein casts is estimated (use comparable areas in both kidneys since one is cross and the other is longitudinal section), and a score assigned as follows:
Interstitial Nephritis (Inflammation not obviously associated with vessels)
Vasculitis
Summed Score
A sum of the five histopathology scores is also calculated for each joint.
If PAS sections are evaluated, they are scored as follows, but not included in the summed score:
PAS score
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